Working Group 3

Working Group 3
We will develop guidelines for the processing and analysis of sequence variation, transcriptomics, proteomics, metabolomics, and phenotypic datasets, using whatever information is available about the samples and analytical protocols. These metadata will be housed alongside the processed data as potential indicators of data quality. We will adopt the guidelines of the International Grape Genome Program for standardising the nomenclature for locus identifiers and defining conventions forgrapevine gene naming. A new version of the annotation of the grapevine reference genome will be developed for this purpose. 
Prof Johan TRYGG
Computational Life Science Cluster (CLiC)
Department of Chemistry
Umeå University
Linneaus vag 10

WG3 Members:

  • WG3 leader: Johan Trygg, Computational Life Science Cluster (CLiC), Department of Chemistry, Umeå University, Umeå, Sweden
  • WG3 vice-leader: Jerome Grimplet, Centro de Investigación y Tecnología Agroalimentaria de Aragón, Zaragoza, Spain
  • Irena Budic-Leto, PhD, Institute for Adriatic Crops and Karst Reclamation Put Duilova 11, Croatia
  • Laura Costantini, Fondazione Edmund Mach - Istituto Agrario san michele all'adige,, Italy
  • José Tomás Matus, Institute of Integrative Systems Biology, Valencia, Spain
  • Pietro Lio, University of Cambridge, United Kingdom
  • Ivan Tsvetkov, Plant Genetic Resources, Agrobioinstitute, Bulgaria
  • Krasimir Russanov, Molecular Genetics Group, Agrobioinstitute, Bulgaria
  • Marco Moretto, Edmund Mach Foundation, Research and Innovation Centre, Italy
  • Aliki kapazoglou, Hellenic Agricultural Organization, Institute of Olive Tree, Greece
  • Nicola Vitulo, PhD, Department of Biotechnology, Uni Verona, Italy
  • Stefania Pilati, PhD, Innovation and Research Center - Fondazione Edmund Mach, Italy
  • Rachel Davidovich-Rikanati, Department of Vegetable Crops, Newe Ya’ar Research Center,, Israel
  • Markus Rienth, University of Sciences and Art Western Switzerland, Switzerland
  • Kocsis László, Department of Horticulture, University of Pannonia, Hungary
  • Nabil Girollet, Ecophysiologie et Génomique Fonctionnelle de la Vigne, France
  • Alessandro Vannozzi, Dipartimento di Agronomia Animali Alimenti Risorse Naturali e Ambiente, Università di Padova, Italy
  • Fabio Palumbo, DAFNAE, Campus of Agripolis, Italy
  • Kristina Gruden, NIB, Slovenia
  • Marusa Pompe Novak, NIB, Slovenia
  • Rita Vignani, University of Siena, Italy
  • Gheorge Savin, ISPHTA, Moldova
  • Ivan Baca, ISPHTA, Moldova
  • Vladimir Cornea, ISPHTA, Moldova
  • Dimitrios Taskos, Hellenic Agricultural Organization, Institute of Olive Tree, Greece
  • Doreen Ware, USDA, USA, USA
  • Georgios Merkouropoulos, Hellenic Agricultural Organization, Institute of Olive Tree, Greece
  • Ana M. Fortes, FCUL, Lisbon, Portugal
  • Herlander Azevedo, CIBTO, University of Porto, Portugal, Portugal
  • Dora Pitsoli, Hellenic Agricultural Organization, Institute of Olive Tree, Greece
  • Ludger Hausmann, JKI Geilweilerkof, Germany
  • Camille Rustenholz, University of Strasbourg, INRA, France




Important Dates

An open call for the Short Term Scientific Missions  (STSM) of COST Action INTEGRAPE is now available using a 2-step evaluation procedure. With STSMs INTEGRAPE can fund your stay in another institution to undertake collaborative research.

STSMs for this grant period should be performed up until end of September 2021.
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If you come from an Inclusiveness Target Country, INTEGRAPE can fund your virtual attendance at the conference of your choice.

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Application till 4 weeks before scheduled conference date and submission of a scientific report and fee invoice within 30 days after end of conference.
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